National Taiwan University

Biomedical Optics Lab

Shi-Wei Chu
https://sites.google.com/site/ntubiooptic/home

Research Field

Physics

Introduction

  • Having published >100 SCI-cited papers. The h-index is 31.
  • Having published over 350 conference papers, delivered >70 invited talks in international conferences.
  • Supervised students had received more than 60 conference awards, 4 thesis awards, and several other research awards.
  • 8 patents on nonlinear microscopy, laser generation, and microscope construction.

This laboratory was established in the Department of Physics, National Taiwan University in August, 2006. The main research interest is to develop advanced optical spectroscopy and microscopy techniques and apply them onto biological systems and nanophotonics inspection. Current research topics include:

Brain functional imaging  

Nonlinear metaphotonics for all-optical switch and super-resolution imaging  


Research Topics

Brain functional imaging

There are four important factors when considering imaging: contrast, resolution, speed, and depth. We work together with world leading brain scientist to develop new technologies to push the boundaries. The aim is to understand how brain works through functional (high-speed) and structural (high-resolution) microscopy. 

Novel Contrast (AI, SRS, iSCAT, 3PF)

Y.-T. Hsieh, K.-C. Jhan, J.-C. Lee, G.-J. Huang, C.-L. Chung, W.-C. Chen, T.-C. Chang, B.-C. Chen, M.-K. Pan*, S.-C. Wu*, and S.-W. Chu*, “TAG-SPARK: Empowering High-Speed Volumetric Imaging with Deep Learning and Spatial Redundancy” Adv. Sci. 11, 2405293 (2024). 

G.-J. Huang, C.-W. Li, P.-Y. Lee, J.-X. Su, K.-C. Chao, L.-A. Chu, A.-S. Chiang, J.-X. Cheng, B.-H. Chen, C.-H. Lu, S.-W. Chu*, and S.-D. Yang,* “Electronic Preresonance Stimulated Raman Scattering Spectromicroscopy Using Multiple-Plate Continuum”, J. Phys. Chem. B 127, 6896-6902 (2023) FutureTech Award 未來科技獎 2023

G.-J. Huang, P.-C. Lai, M.-W. Shen, J.-X. Su, J. Y. Guo, K.-C. Chao, P. Lin, J.-X. Cheng, L.-A. Chu, A.-S. Chiang, B.-H. Chen, C.-H. Lu, S.-W. Chu*, and S.-D. Yang,* “Towards Stimulated Raman Scattering Spectro-Microscopy Across the Entire Raman Active Region Using Multiple-plate Continuum”, Opt. Express 30, 38975-38983 (2022)

Y.-T. Hsiao, T.-Y. Wu, B.-K. Wu, S.-W. Chu, and C.-L. Hsieh*, “Spinning disk interferometric scattering confocal microscopy captures millisecond timescale dynamics of living cells” Opt. Express, 30, 45233-45245 (2022).

K.-J. Hsu, Y.-Y. Lin, A.-S. Chiang, S.-W. Chu*, “Optical properties of adult Drosophila brains in one-, two-, and three-photon microscopy,” Biomed. Opt. Exp. 10, 1627-1637 (2019).

Speed + depth

C.-S. Wang, X. Lai, P.-T. Yeh, P.-C. Liao, R. Kitamura, S.-K. Chen, Y. Liu, M. Cui, S.-W. Chu*, “Multiphoton GRIN-Lens Microendoscopy for Living Brains” Laser Photon. Rev., Early View published online, 25 October 2025

P.-T. Yeh, K.-C. Jhan, E.-P. Chua, W.-C. Chen, S.-W. Chu, S.-C. Wu, S.-K. Chen*, “Discrete photoentrainment of mammalian central clock is regulated by bi-stable dynamic network in the suprachiasmatic nucleus” Nat. Comm. 16, 3331 (2025).

C.-L. Chung, T. Furieri, J.-Y. Lin, J.-C. Lee, Y.-F. Chen, M.-K. Pan, S. Bonora*, and S.-W. Chu*, ”Plug-and-play adaptive optics for two photon high-speed volumetric imaging,” JPhys Photonics 4, 024003 (2022) invited by special issue of “Focus on Ultrasound-Based Systems for Light Control”, 

Y.-F. Chien, J.-Y. Lin, P.-T. Yeh, K.-J. Hsu, Y.-H. Tsai, S.-K. Chen*, and S.-W. Chu*, “Dual GRIN lens two-photon endoscopy for high-speed volumetric and deep brain imaging” Biomed. Opt. Exp., 12, 162-172 (2021).

Resolution + depth 

Y.-H. Lin, L.-W. Wang, Y.-H. Chen, Y.-C. Chan, S.-H. Hu, S.-Y. Wu, C.-S. Chiang, G.-J. Huang, S.-D. Yang, S.-W. Chu, K.-C. Wang, C.-H. Lin, P.-H. Huang, H.-J. Cheng, B.-C. Chen*, L.-A. Chu*, “Revealing intact neuronal circuitry in centimeter-sized formalin-fixed paraffin-embedded brain” eLife 13, RP93212 (2024) 

H.-Y. Lin, L.-A. Chu, H. Yang, K.-J. Hsu, Y.-Y. Lin, K.-H. Lin, S.-W. Chu*, A.- S. Chiang, “Imaging Through the Whole Brain of Drosophila at λ/20 Super-Resolution,” iScience 14, 164-170 (2019).

Nonlinear metaphotonics for 

all-optical switch and super-resolution

 

Study of nonlinear response in plasmonic or semiconductor nanostructures

S. Shinkai, K. Nishida, T.-H. Yen, S.-W. Chu*, and J. Takahara* “All-optical transmission control via degenerate quadrupole modes in silicon metasurfaces” Opt. Lett. 50, 4878 (2025)

K. Nishida, H.-Y. Cheng, M. Petrov, K.-P. Chen, J. Takahara, X. Li, K.-H. Lin, and S.-W. Chu*, “All-optical control of semiconductor nanostructure scattering/absorption via photothermal effect [invited]” J. Opt. Soc. Am. B 41, D61 (2024)

M. P. Vikram, K. Nishida, C.-H. Li, D. Riabov, O. Pashina, Y.-L. Tang, S. V. Makarov, J. Takahara, M. I. Petrov*, and S.-W. Chu* “Photo-thermo-optical modulation of Raman scattering from Mie-resonant silicon nanostructures” Nanophoton. 13, 3581–3589 (2024)

K. Nishida, P.-H. Tseng, Y.-C. Chen, P.-H. Wu, C.-Y. Yang, J.-H. Yang, W.-R. Chen, O. Pashina, M. Petrov, K.-P. Chen,* and S.-W. Chu*, ”Optical bistability in nanosilicon with record low Q-factor” Nano Lett. 23, 11727 (2023)

Y.-L. Tang, T.-H. Yen, K. Nishida, C.-H. Li, Y.-C. Chen, T. Zhang, C.-K. Pai, K.-P. Chen, X. Li*, J. Takahara*, and S.-W. Chu*, “Multipole engineering by displacement resonance: a new degree of freedom of Mie resonance” Nat. Comm. 14, 7213 (2023) NTU/Osaka U press release 

Super-resolution microscopy based on nonlinear scattering

Y.-A. Chen, T.-H. Yen, C.-Y. Yang, J.-J. Chen, C.‐W. Chang, K. Nishida*, and S.-W. Chu*, “Super-resolution imaging of resonance modes in semiconductor nanowires by detecting photothermal nonlinear scattering” Nanophotonics 14, 4565 (2025)

Y. Che, T. Zhang, X. Liu, D. Hu, S. Song, Y. Cai, Y. Cao, J. Zhang, S.-W. Chu, and X. Li, “Nanophotonic inspection of deep-subwavelength integrated optoelectronic chips.” Sci. Adv. 11, eadr8427 (2025)

X. Li, G.-J. Huang, and S.-W. Chu*, “The rise of Mie-tronics-based nonlinear scattering imaging” Laser Photon. Rev., 2200029 (2023) 


Honor
  • 2025 Ming-Wen Chang Optical Technology Award from Taiwan Photonics Society(中華民國光電學會張明文青年光學科技獎)
  • 2020, 2023 Future Technology Award from the Ministry of Science and Technology(科技部 未來科技獎)
  • 2019-2024 NTU Research Performance Award (台大績優加給)
  • 2016-2020 Outstanding young scholar research project award from the Ministry of Science and Technology(科技部 優秀年輕學者研究計畫)
  • 2015 Young Scholars’ Creativity Award of the Foundation for the Advancement of Outstanding Scholarship(傑出人才基金會 年輕學者創新獎)
  • 2015 Excellent Mentor Award of National Taiwan University(優良導師獎, 1% of ~2000 faculties)
  • 2013 Outstanding Teaching Award of National Taiwan University(傑出教學獎, 1% of ~2000 faculties)
  • 2009, 2010, 2011, 2012, 2020, 2021, 2022 Excellent Teaching Award of National Taiwan University(優良教學獎, 10% of ~2000 faculties)
  • 2010 the Exploration Research Award of Pan Wen Yuan Foundation(潘文淵基金會考察研究獎)

Educational Background
  • Doctor of Philosophy in Electro-Optical Engineering, June 2004,

National Taiwan University, Taipei, Taiwan R.O.C.

Dissertation: Harmonics Optical Microscopy -- Principles and Applications

Advisor: Chi-Kuang Sun

  • Master of Science in Electro-Optical Engineering, June 2001,

National Taiwan University, Taipei, Taiwan R.O.C.

Dissertation: Novel Multimodality Nonlinear Microscopy -- Principles and Applications

Advisor: Chi-Kuang Sun

  • Bachelor of Science in Electrical Engineering, June 1999,

National Taiwan University, Taipei, Taiwan R.O.C.


Job Description

Work in a team to develop algorithms for enhancing optical imaging contrast and resolution

Preferred Intern Educational Level

Undergraduate or graduate students are welcome

Skill sets or Qualities

For brain imaging analysis, prior experience on image analysis or AI is preferred. 

Job Description

work in a team to develop super-resolution microscopy for semiconductors

Preferred Intern Educational Level

Undergrad or graduate students are welcome

Skill sets or Qualities

For nonlinear nanophotonics, prior experience on nanoscience or optics is highly recommended.